Gene detail information of Glyur000606s00017350.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G28880.11.00E-153casein kinase I-like 3
NRXP_003526487.10PREDICTED: casein kinase I isoform delta-like isoform X1 [Glycine max]
COGYP_632759.12.00E-19serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH3.00E-173Casein kinase I isoform delta-like
trEMBLtr|I1K9C5|I1K9C5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08880.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00606119697127121+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000606s00017350.2PF00069.20Pkinase92437.30E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.716
SRR1783600control6.687
SRR1783602moderate drought stress12.179
SRR1811619moderate drought stress12.509

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.597
DRR006520Root Summer glycyrrhizin high producing strain30.287
DRR006521Root Winter glycyrrhizin high producing strain9.100
DRR006522Root Winter glycyrrhizin high producing strain8.903
DRR006523Root Summer glycyrrhizin low producing strain58.452
DRR006524Root Summer glycyrrhizin low producing strain58.309
DRR006525Leaf Summer glycyrrhizin high producing strain8.953
DRR006526Leaf Summer glycyrrhizin high producing strain8.954

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.589
SRR2868004Drought Stress(Tissue:root)43.326
SRR2967015Control (Tissue:root)50.109

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave60.943
SRR9715740Leave41.396
SRR9715741Leave82.158
SRR9715739Root5.358
SRR9715742Root32.275
SRR9715743Root27.936

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h64.568
SRR8749028MeJA induced 9h71.377
SRR8749029MeJA induced 9h117.621
SRR8749030Uninduced241.944
SRR8749031Uninduced407.358
SRR8749032Uninduced265.105

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.193
SRR8400027Control-Root18.110

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved