Gene detail information of Glyur000607s00021616.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32570.1 | 5.00E-34 | TIFY domain protein 8 |
| NR | XP_004501285.1 | 1.51E-158 | PREDICTED: protein TIFY 8-like [Cicer arietinum] |
| Swissprot | tr|Q84MB2|TIF8_ARATH | 9.00E-45 | Protein TIFY 8 |
| trEMBL | tr|V7AXV6|V7AXV6_PHAVU | 1.00E-158 | Uncharacterized protein {ECO:0000313|EMBL:ESW09066.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00607 | 97233 | 100939 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Tify |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000607s00021616.1 | PF06200.9 | tify | 303 | 335 | 2.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.604 |
| SRR1783600 | control | 11.356 |
| SRR1783602 | moderate drought stress | 4.548 |
| SRR1811619 | moderate drought stress | 4.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.130 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.949 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.282 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.065 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.416 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.352 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.837 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.389 |
| SRR2967015 | Control (Tissue:root) | 4.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.427 |
| SRR9715740 | Leave | 2.284 |
| SRR9715741 | Leave | 1.076 |
| SRR9715739 | Root | 2.654 |
| SRR9715742 | Root | 3.576 |
| SRR9715743 | Root | 2.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.817 |
| SRR8749028 | MeJA induced 9h | 1.702 |
| SRR8749029 | MeJA induced 9h | 1.005 |
| SRR8749030 | Uninduced | 0.294 |
| SRR8749031 | Uninduced | 0.577 |
| SRR8749032 | Uninduced | 0.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.903 |
| SRR8400027 | Control-Root | 8.904 |