Gene detail information of Glyur000607s00021618.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G15550.15.00E-84gibberellin 3-oxidase 1
NRABI64150.10gibberellin 3-oxidase [Pisum sativum]
COGYP_007565700.13.00E-28putative oxidoreductase [Ilumatobacter coccineus YM16-304]
Swissprottr|O24648|G3OX_PEA4.00E-117Gibberellin 3-beta-dioxygenase 1
trEMBLtr|B2BA73|B2BA73_PEA0Gibberellin 3-oxidase {ECO:0000313|EMBL:ABI64150.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00607106476109198+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04124E1.14.11.15 EC:1.14.11.15 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000607s00021618.1PF14226.1DIOX_N541552.60E-22
Glyur000607s00021618.1PF03171.152OG-FeII_Oxy2053049.60E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.425
SRR1783600control0.419
SRR1783602moderate drought stress0.557
SRR1811619moderate drought stress0.589

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.083
DRR006520Root Summer glycyrrhizin high producing strain0.082
DRR006521Root Winter glycyrrhizin high producing strain20.654
DRR006522Root Winter glycyrrhizin high producing strain20.268
DRR006523Root Summer glycyrrhizin low producing strain0.766
DRR006524Root Summer glycyrrhizin low producing strain0.747
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.733
SRR2868004Drought Stress(Tissue:root)1.933
SRR2967015Control (Tissue:root)1.444

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.079
SRR9715740Leave0.000
SRR9715741Leave0.096
SRR9715739Root0.375
SRR9715742Root0.190
SRR9715743Root0.071

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.055
SRR8749028MeJA induced 9h0.176
SRR8749029MeJA induced 9h0.439
SRR8749030Uninduced10.587
SRR8749031Uninduced12.106
SRR8749032Uninduced17.428

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.392
SRR8400027Control-Root0.121

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved