Gene detail information of Glyur000607s00021621.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32551.10LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
NRXP_004498638.10PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Cicer arietinum]
COGYP_001865069.13.00E-34hypothetical protein Npun_F1419 [Nostoc punctiforme PCC 73102]
Swissprottr|Q9FUY2|LEUNG_ARATH0Transcriptional corepressor LEUNIG
trEMBLtr|K7MMX6|K7MMX6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G30910.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00607127800137411-


Gene family

Gene familysubfamily
Transcription Factors FamilyLUG
Ubiquitin FamilyDWD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000607s00021621.1PF08513.6LisH10351.90E-06
Glyur000607s00021621.1PF00400.27WD406316634.00E-05
Glyur000607s00021621.1PF00400.27WD406697065.70E-12
Glyur000607s00021621.1PF00400.27WD407137504.10E-07
Glyur000607s00021621.1PF00400.27WD407958291.20E-08
Glyur000607s00021621.1PF00400.27WD408819160.0022


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.594
SRR1783600control25.117
SRR1783602moderate drought stress40.367
SRR1811619moderate drought stress40.725

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.389
DRR006520Root Summer glycyrrhizin high producing strain25.041
DRR006521Root Winter glycyrrhizin high producing strain19.306
DRR006522Root Winter glycyrrhizin high producing strain18.620
DRR006523Root Summer glycyrrhizin low producing strain23.666
DRR006524Root Summer glycyrrhizin low producing strain23.833
DRR006525Leaf Summer glycyrrhizin high producing strain16.349
DRR006526Leaf Summer glycyrrhizin high producing strain16.179

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.059
SRR2868004Drought Stress(Tissue:root)37.364
SRR2967015Control (Tissue:root)39.503

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.590
SRR9715740Leave30.071
SRR9715741Leave34.422
SRR9715739Root13.445
SRR9715742Root30.573
SRR9715743Root28.258

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.300
SRR8749028MeJA induced 9h30.730
SRR8749029MeJA induced 9h18.902
SRR8749030Uninduced29.130
SRR8749031Uninduced32.848
SRR8749032Uninduced17.375

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.109
SRR8400027Control-Root31.379

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved