Gene detail information of Glyur000608s00025887.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14740.22.00E-97carbonic anhydrase 2
NRKHN00357.14.06E-160Carbonic anhydrase, chloroplastic [Glycine soja]
COGYP_004113627.11.00E-43carbonate dehydratase [Desulfurispirillum indicum S5]
Swissprottr|P27141|CAHC_TOBAC3.00E-127Carbonic anhydrase, chloroplastic (Precursor)
trEMBLtr|G7K1D3|G7K1D3_MEDTR2.00E-160Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00608103029107653-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01673cynT, can EC:4.2.1.1 Nitrogen metabolism map00910


Gene Ontology

biological_process

GO:0015976  carbon utilization


molecular_function

GO:0004089  carbonate dehydratase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000608s00025887.1PF00484.14Pro_CA712371.10E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control79.771
SRR1783600control81.922
SRR1783602moderate drought stress37.698
SRR1811619moderate drought stress38.371

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain68.738
DRR006520Root Summer glycyrrhizin high producing strain71.345
DRR006521Root Winter glycyrrhizin high producing strain24.652
DRR006522Root Winter glycyrrhizin high producing strain23.736
DRR006523Root Summer glycyrrhizin low producing strain69.821
DRR006524Root Summer glycyrrhizin low producing strain68.628
DRR006525Leaf Summer glycyrrhizin high producing strain213.692
DRR006526Leaf Summer glycyrrhizin high producing strain211.952

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)120.883
SRR2868004Drought Stress(Tissue:root)157.774
SRR2967015Control (Tissue:root)102.537

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave433.366
SRR9715740Leave434.503
SRR9715741Leave377.480
SRR9715739Root46.616
SRR9715742Root98.132
SRR9715743Root80.732

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h316.662
SRR8749028MeJA induced 9h297.219
SRR8749029MeJA induced 9h481.393
SRR8749030Uninduced650.273
SRR8749031Uninduced588.759
SRR8749032Uninduced332.201

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root86.633
SRR8400027Control-Root100.086

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved