Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000608s00025890.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G23540.1	2.00E-107	Protein kinase superfamily protein
NR	KHN00359.1	0	Proline-rich receptor-like protein kinase PERK13 [Glycine soja]
COG	YP_001958461.1	3.00E-21	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9CAL8\|PEK13_ARATH	5.00E-133	Proline-rich receptor-like protein kinase PERK13
trEMBL	tr\|I1JC30\|I1JC30_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G04010.1}

Sequence

Transcript Sequence

>Glyur000608s00025890.1
ATTTCTGAGAAATCAAGGTTTAGATTTCTGAGAGAATCAGAAATGGCTAAGGAAAACAAGTCAAATGAAACGTCAACTTCTCATTCAGAAAAGGCTCCAGCTAATGAAACGTCAACTTCTCAATCTCATACAGAAAAGGCTTCAGCTCCGTCGCCATCATCATTAATTTTGCCATCCTTTGTCTCCTCCTCGGGTTCCCCGGAAACCGCACCTTCAAAGTCTCCTCCGCCGTCACCGCCGACGTCTCCTCCTCCGTCTTCTCCGCCGCCACAGTCTCATTCTCCACCACCTTCCCCGTCTCCGTCTCCGTCGCCGCCACCGAAATCGCAATCTCCACCGCCGCAATCTTCNCCGCCTCCATCAAGTCCACCGCCATCAAAAGGTTCAACTCCTCCCCCCTCTCCGTCGCCGNCACCCCCAACACCACCATCACAATCTCCGCCACCTCAATCACCGACTCCGTCAACACCATCCCCTAACGGTAATTCTCCCCCTCCATCACAATCTAACTCTCCTTCTCCACCTCCTCCAGTTCAAAATGTACCTTCCTCTTCTTCCCAAAATACCCCTTNTCCTCCTCCTTGGACGTCGCCGCCAACCGGTTCTTCAGGGCAAAACAACAACCCTTCGCCGCTACAGTCACCACCACCCGTTCCACCTGGCTCCCGTTCAAAACCAAGCGCTTCTCCTTCTAAAAGCACCGCCCCGTCCACGTCACCAACCTCTGGAGATAAAACAGGGCAATACGTTGGTTTTGCTTTCGCCACCGCTTTCGCTGTTGCCTTCGTTGCCGCGATTCTCTTTTTTGTANTGAGGAGGAAGGACAAACGAGCTGGGAATGTCTATGCCATGCCACCCTTCAAGAAATCTCAAATGAAAGGAGGAGATGTGCATTACTATGTAGAGGACCCAGGTTTTGGGAATGGTGCACAAGATGGGTTTTATAGTGCAGGTGCCATGCTGAGATCTCCTTCAGACCCAGCACAACAANTGAGTGCTGGTCCTATAGTTTTCACCTACGACAAGATCGTGGAGATCACCAATGGGTTTTCCAGTGAGAATGTGATAGGGGAAGGTGGATTTGGGCGTGTTTACAAGGCTTCAATGGCGGATGGNAGGGTGGGAGCAATTAAGCTTTTGAAGGCCGGTAGTGGGCAAGGAGAGAGGGAGTTCAAGGCAGAGGTTGAGATCATTAGCCGTGTTCATCATCGACACTTGGTATCGTTAATTGGGTATTGCATATCTGAGAAGCAAAGAGTGCTCATCTATGAGTATGTTCCTAATGGGAATCTCGATCAGCACTTGCATGCAAGTGGAAGAGTTTTGGATTGGCCTAAGAGGATGAAGATAGCAATTGGTGCTGCAAGGGGCCTAGCATATCTACATGAAGGCTGCAACCCAAGGATTATTCACAGAGATATTAAGTCGGCAAATATACTTTTGGATGATGCTTATGAGGCACAGGTTGCAGACTTTGGACTTGCCAGGCTAACCGATGATGCTAATACACATGTATCAACTAGGGTGATGGGTACCTTCGGAAAACTAACATGCGCTTTGAATGCTGTTTTGCTGTGCCCACAGGCTCGTCCACTTCTCCTCCGTGCAATTGAGACAGGCGACTTTGGTGAACTAGCAGACCGAAGGCTTGAACGGCAATACGTTGACAGTGAAATGCTCAGAATGATTGAGGCAGCTGCAGCATGTGTGGCAAGAGCCTTGGACAGTGGAGACCAACTATATGATCTATCTAATGGGGTGAAATATGGGCAGAGCACAGTTTATGATTCTGGCATGTACAATGAAGACATTATGAGATTCAGAAGAATAGCTAATGGCAGCTTTGATGATTCTGAATACGACATGTACAGCACAGAATACAGTTCAGCTTCAGCAGATATGTCTGGATCCACACATGCATGGATACCACATAGTTCAAGTGTTAATTCAGATATTAGAGCTTTCCAAGGCCAAAGGGGAAGTGCTTCTGATCACAGGTTTTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00608	132242	135767	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.6.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000608s00025890.1	PF07714.12	Pkinase_Tyr	353	504	1.30E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.122
SRR1783600	control	0.148
SRR1783602	moderate drought stress	0.059
SRR1811619	moderate drought stress	0.088

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.704
DRR006520	Root Summer glycyrrhizin high producing strain	0.658
DRR006521	Root Winter glycyrrhizin high producing strain	0.055
DRR006522	Root Winter glycyrrhizin high producing strain	0.054
DRR006523	Root Summer glycyrrhizin low producing strain	0.603
DRR006524	Root Summer glycyrrhizin low producing strain	0.374
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.092
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.092

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.945
SRR2868004	Drought Stress(Tissue:root)	0.855
SRR2967015	Control (Tissue:root)	0.776

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.476
SRR9715740	Leave	0.032
SRR9715741	Leave	0.231
SRR9715739	Root	0.546
SRR9715742	Root	1.141
SRR9715743	Root	0.532

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.484
SRR8749028	MeJA induced 9h	0.511
SRR8749029	MeJA induced 9h	0.524
SRR8749030	Uninduced	0.984
SRR8749031	Uninduced	0.840
SRR8749032	Uninduced	0.574

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.577
SRR8400027	Control-Root	1.017