Gene detail information of Glyur000611s00026444.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05980.11.00E-177DHFS-FPGS homolog B
NRXP_006601980.10PREDICTED: folylpolyglutamate synthase-like isoform X2 [Glycine max]
COGYP_007298356.13.00E-52folylpolyglutamate synthase/dihydrofolate synthase [Thermoanaerobacterium thermosaccharolyticum M0795]
Swissprottr|F4K2A1|FPGS1_ARATH0Folylpolyglutamate synthase {ECO:0000250|UniProtKB:Q05932, ECO:0000312|EMBL:CAC80839.2}
trEMBLtr|K7MPN5|K7MPN5_SOYBN0Folylpolyglutamate synthase {ECO:0000256|PIRNR:PIRNR038895}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006115273663278+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01930FPGS EC:6.3.2.17 Folate biosynthesis map00790
Antifolate resistancemap01523


Gene Ontology

biological_process

GO:0009058  biosynthetic process

GO:0009396  folic acid-containing compound biosynthetic process


molecular_function

GO:0004326  tetrahydrofolylpolyglutamate synthase activity

GO:0005524  ATP binding

GO:0016874  ligase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000611s00026444.1PF08245.7Mur_ligase_M682362.40E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.191
SRR1783600control7.326
SRR1783602moderate drought stress9.262
SRR1811619moderate drought stress9.304

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.639
DRR006520Root Summer glycyrrhizin high producing strain15.770
DRR006521Root Winter glycyrrhizin high producing strain21.754
DRR006522Root Winter glycyrrhizin high producing strain21.621
DRR006523Root Summer glycyrrhizin low producing strain14.124
DRR006524Root Summer glycyrrhizin low producing strain14.390
DRR006525Leaf Summer glycyrrhizin high producing strain8.150
DRR006526Leaf Summer glycyrrhizin high producing strain7.861

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.531
SRR2868004Drought Stress(Tissue:root)13.480
SRR2967015Control (Tissue:root)12.102

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.582
SRR9715740Leave6.883
SRR9715741Leave8.900
SRR9715739Root4.693
SRR9715742Root8.242
SRR9715743Root7.928

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.750
SRR8749028MeJA induced 9h17.316
SRR8749029MeJA induced 9h10.866
SRR8749030Uninduced11.952
SRR8749031Uninduced11.667
SRR8749032Uninduced13.497

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.200
SRR8400027Control-Root16.587

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved