Gene detail information of Glyur000611s00026450.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G39770.20Glucose-1-phosphate adenylyltransferase family protein
NRXP_004490906.10PREDICTED: mannose-1-phosphate guanylyltransferase 1-like [Cicer arietinum]
COGYP_644397.13.00E-57nucleotidyl transferase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|O22287|GMPP1_ARATH0Mannose-1-phosphate guanylyltransferase 1
trEMBLtr|C0KWD9|C0KWD9_9ERIC0GDP-D-mannose pyrophosphorylase {ECO:0000313|EMBL:ACN38266.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0061196949101218-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00966GMPP EC:2.7.7.13 Fructose and mannose metabolism map00051
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0016779  nucleotidyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000611s00026450.1PF00483.18NTP_transferase22282.30E-48
Glyur000611s00026450.1PF00132.19Hexapep2612941.30E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.560
SRR1783600control7.798
SRR1783602moderate drought stress4.233
SRR1811619moderate drought stress4.149

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.195
DRR006520Root Summer glycyrrhizin high producing strain6.138
DRR006521Root Winter glycyrrhizin high producing strain0.349
DRR006522Root Winter glycyrrhizin high producing strain0.339
DRR006523Root Summer glycyrrhizin low producing strain7.602
DRR006524Root Summer glycyrrhizin low producing strain7.650
DRR006525Leaf Summer glycyrrhizin high producing strain2.089
DRR006526Leaf Summer glycyrrhizin high producing strain2.040

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.087
SRR2868004Drought Stress(Tissue:root)19.658
SRR2967015Control (Tissue:root)20.835

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.527
SRR9715740Leave2.233
SRR9715741Leave5.314
SRR9715739Root24.467
SRR9715742Root11.892
SRR9715743Root16.458

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.945
SRR8749028MeJA induced 9h18.191
SRR8749029MeJA induced 9h11.754
SRR8749030Uninduced5.921
SRR8749031Uninduced3.345
SRR8749032Uninduced6.779

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.926
SRR8400027Control-Root36.213

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved