Gene detail information of Glyur000614s00017204.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63840.10Glycosyl hydrolases family 31 protein
NRXP_004502983.10PREDICTED: neutral alpha-glucosidase AB-like [Cicer arietinum]
COGYP_002509652.11.00E-119Alpha-glucosidase [Halothermothrix orenii H 168]
Swissprottr|Q9FN05|PSL5_ARATH0Probable glucan 1,3-alpha-glucosidase (Precursor)
trEMBLtr|G7JC76|G7JC76_MEDTR0Neutral alpha-glucosidase AB {ECO:0000313|EMBL:AES85382.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0061495982101850+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH31


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05546GANAB EC:3.2.1.84 N-Glycan biosynthesis map00510
Protein processing in endoplasmic reticulummap04141


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000614s00017204.1PF13802.1Gal_mutarotas_22323078.90E-17
Glyur000614s00017204.1PF01055.21Glyco_hydro_313407841.80E-160


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control57.865
SRR1783600control58.140
SRR1783602moderate drought stress43.852
SRR1811619moderate drought stress43.339

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain55.201
DRR006520Root Summer glycyrrhizin high producing strain54.499
DRR006521Root Winter glycyrrhizin high producing strain32.070
DRR006522Root Winter glycyrrhizin high producing strain31.583
DRR006523Root Summer glycyrrhizin low producing strain42.898
DRR006524Root Summer glycyrrhizin low producing strain42.779
DRR006525Leaf Summer glycyrrhizin high producing strain24.843
DRR006526Leaf Summer glycyrrhizin high producing strain24.932

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)48.534
SRR2868004Drought Stress(Tissue:root)35.433
SRR2967015Control (Tissue:root)33.655

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.968
SRR9715740Leave18.140
SRR9715741Leave18.120
SRR9715739Root34.307
SRR9715742Root44.040
SRR9715743Root39.716

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.042
SRR8749028MeJA induced 9h32.282
SRR8749029MeJA induced 9h11.996
SRR8749030Uninduced13.845
SRR8749031Uninduced4.361
SRR8749032Uninduced5.054

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.777
SRR8400027Control-Root44.632

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved