Gene detail information of Glyur000615s00024012.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G20950.20Glycosyl hydrolase family protein
NRKHN20835.10Lysosomal beta glucosidase [Glycine soja]
COGYP_003265703.10glycoside hydrolase [Haliangium ochraceum DSM 14365]
Swissprottr|A5JTQ3|XYL2_MEDSV1.00E-33Alpha-L-arabinofuranosidase (Precursor)
trEMBLtr|I1MW70|I1MW70_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G24410.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006156348168809-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05349bglX EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000615s00024012.1PF00933.16Glyco_hydro_3473752.50E-85
Glyur000615s00024012.1PF01915.17Glyco_hydro_3_C3915872.70E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.028
SRR1783600control8.879
SRR1783602moderate drought stress4.327
SRR1811619moderate drought stress4.367

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.966
DRR006520Root Summer glycyrrhizin high producing strain18.994
DRR006521Root Winter glycyrrhizin high producing strain1.345
DRR006522Root Winter glycyrrhizin high producing strain1.058
DRR006523Root Summer glycyrrhizin low producing strain23.377
DRR006524Root Summer glycyrrhizin low producing strain23.335
DRR006525Leaf Summer glycyrrhizin high producing strain27.861
DRR006526Leaf Summer glycyrrhizin high producing strain29.041

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)71.500
SRR2868004Drought Stress(Tissue:root)43.586
SRR2967015Control (Tissue:root)50.482

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave46.951
SRR9715740Leave9.698
SRR9715741Leave33.982
SRR9715739Root14.429
SRR9715742Root32.510
SRR9715743Root29.913

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.588
SRR8749028MeJA induced 9h40.747
SRR8749029MeJA induced 9h41.440
SRR8749030Uninduced61.172
SRR8749031Uninduced26.397
SRR8749032Uninduced18.896

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.889
SRR8400027Control-Root35.506

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved