Gene detail information of Glyur000616s00026601.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G38260.15.00E-90Protein kinase superfamily protein
NRKEH40352.10stress-induced receptor-like kinase [Medicago truncatula]
COGYP_001958461.13.00E-24hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH1.00E-95Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|A0A072VF19|A0A072VF19_MEDTR0Stress-induced receptor-like kinase {ECO:0000313|EMBL:KEH40352.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006166771176805-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000616s00026601.1PF07714.12Pkinase_Tyr3874300.0002
Glyur000616s00026601.1PF00069.20Pkinase95512181.70E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.770
SRR1783600control0.760
SRR1783602moderate drought stress0.431
SRR1811619moderate drought stress0.488

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.598
DRR006520Root Summer glycyrrhizin high producing strain1.496
DRR006521Root Winter glycyrrhizin high producing strain3.669
DRR006522Root Winter glycyrrhizin high producing strain3.362
DRR006523Root Summer glycyrrhizin low producing strain7.873
DRR006524Root Summer glycyrrhizin low producing strain8.141
DRR006525Leaf Summer glycyrrhizin high producing strain6.001
DRR006526Leaf Summer glycyrrhizin high producing strain6.329

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.875
SRR2868004Drought Stress(Tissue:root)6.667
SRR2967015Control (Tissue:root)8.173

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.779
SRR9715740Leave3.835
SRR9715741Leave2.536
SRR9715739Root0.314
SRR9715742Root0.488
SRR9715743Root0.663

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.736
SRR8749028MeJA induced 9h14.050
SRR8749029MeJA induced 9h11.910
SRR8749030Uninduced15.517
SRR8749031Uninduced10.303
SRR8749032Uninduced12.657

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.753
SRR8400027Control-Root4.503

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved