Gene detail information of Glyur000616s00026608.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G18250.14.00E-21receptor serine/threonine kinase, putative
NRKHN05167.13.83E-174Putative receptor-like protein kinase [Glycine soja]
Swissprottr|Q9FID5|Y5393_ARATH4.00E-29Probable receptor-like protein kinase At5g39030 (Precursor)
trEMBLtr|V7CTJ3|V7CTJ3_PHAVU6.00E-158Uncharacterized protein {ECO:0000313|EMBL:ESW33507.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00616115297119385+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004713  protein tyrosine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030247  polysaccharide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000616s00026608.1PF13947.1GUB_WAK_bind31976.50E-11
Glyur000616s00026608.1PF07714.12Pkinase_Tyr3574105.50E-05
Glyur000616s00026608.1PF07714.12Pkinase_Tyr4155051.80E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.358
SRR1783600control0.336
SRR1783602moderate drought stress0.360
SRR1811619moderate drought stress0.366

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.679
DRR006520Root Summer glycyrrhizin high producing strain0.362
DRR006521Root Winter glycyrrhizin high producing strain0.261
DRR006522Root Winter glycyrrhizin high producing strain0.356
DRR006523Root Summer glycyrrhizin low producing strain0.429
DRR006524Root Summer glycyrrhizin low producing strain0.426
DRR006525Leaf Summer glycyrrhizin high producing strain0.578
DRR006526Leaf Summer glycyrrhizin high producing strain0.476

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.538
SRR2868004Drought Stress(Tissue:root)1.409
SRR2967015Control (Tissue:root)0.761

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.777
SRR9715740Leave0.701
SRR9715741Leave0.486
SRR9715739Root1.758
SRR9715742Root0.203
SRR9715743Root0.493

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.046
SRR8749030Uninduced0.169
SRR8749031Uninduced0.059
SRR8749032Uninduced0.041

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.339
SRR8400027Control-Root0.399

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved