Gene detail information of Glyur000620s00017795.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04845.1 | 1.00E-73 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_003601577.1 | 2.86E-121 | N-acetyltransferase 9-like protein [Medicago truncatula] |
| COG | YP_645369.1 | 1.00E-09 | N-acetyltransferase GCN5 [Rubrobacter xylanophilus DSM 9941] |
| trEMBL | tr|G7J9I9|G7J9I9_MEDTR | 1.00E-121 | Uncharacterized protein {ECO:0000313|EMBL:AFK36870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00620 | 70996 | 74674 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000620s00017795.1 | PF13302.1 | Acetyltransf_3 | 23 | 172 | 4.00E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.474 |
| SRR1783600 | control | 3.331 |
| SRR1783602 | moderate drought stress | 3.230 |
| SRR1811619 | moderate drought stress | 3.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.228 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.174 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.741 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.566 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.468 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.500 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.928 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.746 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.786 |
| SRR2967015 | Control (Tissue:root) | 12.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.554 |
| SRR9715740 | Leave | 5.820 |
| SRR9715741 | Leave | 7.842 |
| SRR9715739 | Root | 2.006 |
| SRR9715742 | Root | 4.615 |
| SRR9715743 | Root | 3.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.860 |
| SRR8749028 | MeJA induced 9h | 4.782 |
| SRR8749029 | MeJA induced 9h | 2.567 |
| SRR8749030 | Uninduced | 4.838 |
| SRR8749031 | Uninduced | 1.614 |
| SRR8749032 | Uninduced | 2.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.074 |
| SRR8400027 | Control-Root | 12.674 |