Gene detail information of Glyur000620s00017804.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05010.13.00E-38ethylene-forming enzyme
NRACJ84385.13.01E-65unknown [Medicago truncatula]
COGYP_007565700.11.00E-10putative oxidoreductase [Ilumatobacter coccineus YM16-304]
Swissprottr|Q9MB94|ACCO_PRUMU1.00E-581-aminocyclopropane-1-carboxylate oxidase
trEMBLtr|B7FI06|B7FI06_MEDTR1.00E-65Putative uncharacterized protein {ECO:0000313|EMBL:ACJ84385.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00620119012121025+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05933E1.14.17.4 EC:1.14.17.4 Cysteine and methionine metabolism map00270


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000620s00017804.1PF03171.152OG-FeII_Oxy4458.00E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.153
SRR1783600control1.241
SRR1783602moderate drought stress2.021
SRR1811619moderate drought stress1.993

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.247
DRR006520Root Summer glycyrrhizin high producing strain0.169
DRR006521Root Winter glycyrrhizin high producing strain0.975
DRR006522Root Winter glycyrrhizin high producing strain1.374
DRR006523Root Summer glycyrrhizin low producing strain0.299
DRR006524Root Summer glycyrrhizin low producing strain0.328
DRR006525Leaf Summer glycyrrhizin high producing strain107.570
DRR006526Leaf Summer glycyrrhizin high producing strain107.933

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.893
SRR2868004Drought Stress(Tissue:root)95.163
SRR2967015Control (Tissue:root)79.915

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave212.434
SRR9715740Leave135.455
SRR9715741Leave187.555
SRR9715739Root0.024
SRR9715742Root5.995
SRR9715743Root4.852

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.388
SRR8749028MeJA induced 9h25.758
SRR8749029MeJA induced 9h7.958
SRR8749030Uninduced703.129
SRR8749031Uninduced1311.700
SRR8749032Uninduced356.387

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.788
SRR8400027Control-Root5.196

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved