Gene detail information of Glyur000621s00034377.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00621 | 127190 | 128389 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01937 | pyrG, CTPS | EC:6.3.4.2 | Pyrimidine metabolism | map00240 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.171 |
| SRR1783600 | control | 3.799 |
| SRR1783602 | moderate drought stress | 6.173 |
| SRR1811619 | moderate drought stress | 5.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.913 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.192 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.147 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.170 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.471 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.271 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.759 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.308 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.776 |
| SRR2967015 | Control (Tissue:root) | 2.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.752 |
| SRR9715740 | Leave | 2.687 |
| SRR9715741 | Leave | 6.886 |
| SRR9715739 | Root | 0.404 |
| SRR9715742 | Root | 1.253 |
| SRR9715743 | Root | 1.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.242 |
| SRR8749028 | MeJA induced 9h | 1.005 |
| SRR8749029 | MeJA induced 9h | 0.883 |
| SRR8749030 | Uninduced | 0.788 |
| SRR8749031 | Uninduced | 0.808 |
| SRR8749032 | Uninduced | 0.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.474 |
| SRR8400027 | Control-Root | 16.617 |