Gene detail information of Glyur000623s00024131.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G53050.10Protein kinase superfamily protein
NRXP_004487708.10PREDICTED: probable serine/threonine-protein kinase At1g09600-like [Cicer arietinum]
COGYP_004179287.17.00E-24serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Swissprottr|F4I114|Y1960_ARATH0Probable serine/threonine-protein kinase At1g09600
trEMBLtr|V7BWN4|V7BWN4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW21453.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006231729923708+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000623s00024131.1PF00069.20Pkinase1344188.50E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.757
SRR1783600control25.591
SRR1783602moderate drought stress24.318
SRR1811619moderate drought stress24.184

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.909
DRR006520Root Summer glycyrrhizin high producing strain20.836
DRR006521Root Winter glycyrrhizin high producing strain17.962
DRR006522Root Winter glycyrrhizin high producing strain17.812
DRR006523Root Summer glycyrrhizin low producing strain24.057
DRR006524Root Summer glycyrrhizin low producing strain23.501
DRR006525Leaf Summer glycyrrhizin high producing strain13.110
DRR006526Leaf Summer glycyrrhizin high producing strain13.227

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.087
SRR2868004Drought Stress(Tissue:root)33.852
SRR2967015Control (Tissue:root)33.782

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.344
SRR9715740Leave13.780
SRR9715741Leave12.362
SRR9715739Root19.151
SRR9715742Root29.116
SRR9715743Root24.392

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.486
SRR8749028MeJA induced 9h11.878
SRR8749029MeJA induced 9h7.163
SRR8749030Uninduced2.287
SRR8749031Uninduced0.419
SRR8749032Uninduced0.980

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.648
SRR8400027Control-Root33.890

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved