Gene detail information of Glyur000623s00024132.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G15354.10SPA1-related 3
NRXP_004487709.10PREDICTED: protein SPA1-RELATED 3-like isoform X1 [Cicer arietinum]
COGYP_007097021.15.00E-10WD40 repeat-containing protein [Chamaesiphon minutus PCC 6605]
Swissprottr|Q9LJR3|SPA3_ARATH0Protein SPA1-RELATED 3
trEMBLtr|K7LWD8|K7LWD8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G35320.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006233699442917+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1
Ubiquitin FamilyDWD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000623s00024132.1PF00069.20Pkinase2493383.60E-06
Glyur000623s00024132.1PF00400.27WD406526888.20E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.110
SRR1783600control2.151
SRR1783602moderate drought stress3.835
SRR1811619moderate drought stress3.799

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.152
DRR006520Root Summer glycyrrhizin high producing strain5.125
DRR006521Root Winter glycyrrhizin high producing strain16.276
DRR006522Root Winter glycyrrhizin high producing strain15.959
DRR006523Root Summer glycyrrhizin low producing strain5.274
DRR006524Root Summer glycyrrhizin low producing strain5.353
DRR006525Leaf Summer glycyrrhizin high producing strain25.515
DRR006526Leaf Summer glycyrrhizin high producing strain25.314

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.110
SRR2868004Drought Stress(Tissue:root)9.655
SRR2967015Control (Tissue:root)5.067

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave47.217
SRR9715740Leave62.460
SRR9715741Leave52.884
SRR9715739Root0.276
SRR9715742Root4.218
SRR9715743Root3.729

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.142
SRR8749028MeJA induced 9h18.070
SRR8749029MeJA induced 9h10.930
SRR8749030Uninduced7.523
SRR8749031Uninduced1.475
SRR8749032Uninduced2.844

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.332
SRR8400027Control-Root8.246

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved