Gene detail information of Glyur000623s00024134.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G15350.21.00E-174Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
NRXP_004487712.10PREDICTED: xylosyltransferase 2-like isoform X1 [Cicer arietinum]
trEMBLtr|G7IRB3|G7IRB3_MEDTR0Core-2/I-branching enzyme {ECO:0000313|EMBL:AES67008.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006234419847910-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT14


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0008375  acetylglucosaminyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000623s00024134.1PF02485.16Branch803397.90E-70


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.417
SRR1783600control16.613
SRR1783602moderate drought stress17.953
SRR1811619moderate drought stress17.771

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.746
DRR006520Root Summer glycyrrhizin high producing strain20.296
DRR006521Root Winter glycyrrhizin high producing strain26.905
DRR006522Root Winter glycyrrhizin high producing strain26.022
DRR006523Root Summer glycyrrhizin low producing strain15.035
DRR006524Root Summer glycyrrhizin low producing strain15.275
DRR006525Leaf Summer glycyrrhizin high producing strain13.151
DRR006526Leaf Summer glycyrrhizin high producing strain12.969

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.315
SRR2868004Drought Stress(Tissue:root)33.679
SRR2967015Control (Tissue:root)23.914

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.108
SRR9715740Leave25.625
SRR9715741Leave24.213
SRR9715739Root12.650
SRR9715742Root19.106
SRR9715743Root17.977

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.234
SRR8749028MeJA induced 9h11.541
SRR8749029MeJA induced 9h5.888
SRR8749030Uninduced16.094
SRR8749031Uninduced8.121
SRR8749032Uninduced5.045

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.263
SRR8400027Control-Root17.581

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved