Gene detail information of Glyur000625s00022680.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78800.10UDP-Glycosyltransferase superfamily protein
NRXP_004496759.10PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2-like [Cicer arietinum]
COGYP_007161763.15.00E-23group 1 glycosyl transferase [Cyanobacterium aponinum PCC 10605]
Swissprottr|O24301|SUS2_PEA7.00E-14Sucrose synthase 2
trEMBLtr|C6TI07|C6TI07_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G35950.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0062551787835+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03843ALG2 EC:2.4.1.132 2.4.1.257 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0004378  GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity

GO:0033164  glycolipid 6-alpha-mannosyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000625s00022680.1PF13579.1Glyco_trans_4_4211774.10E-09
Glyur000625s00022680.1PF00534.15Glycos_transf_12093793.10E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.746
SRR1783600control9.935
SRR1783602moderate drought stress7.312
SRR1811619moderate drought stress7.279

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.022
DRR006520Root Summer glycyrrhizin high producing strain6.762
DRR006521Root Winter glycyrrhizin high producing strain12.929
DRR006522Root Winter glycyrrhizin high producing strain12.131
DRR006523Root Summer glycyrrhizin low producing strain4.533
DRR006524Root Summer glycyrrhizin low producing strain4.327
DRR006525Leaf Summer glycyrrhizin high producing strain4.213
DRR006526Leaf Summer glycyrrhizin high producing strain4.497

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.228
SRR2868004Drought Stress(Tissue:root)12.375
SRR2967015Control (Tissue:root)13.816

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.370
SRR9715740Leave6.759
SRR9715741Leave7.735
SRR9715739Root1.672
SRR9715742Root3.416
SRR9715743Root4.534

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.643
SRR8749028MeJA induced 9h23.933
SRR8749029MeJA induced 9h18.244
SRR8749030Uninduced45.804
SRR8749031Uninduced60.564
SRR8749032Uninduced35.895

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.148
SRR8400027Control-Root9.739

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved