Gene detail information of Glyur000625s00022682.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G05200.10cysteine-rich RLK (RECEPTOR-like protein kinase) 25
NRXP_003592436.10Cysteine-rich receptor-like protein kinase [Medicago truncatula]
COGYP_004864274.12.00E-27protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|Q9M0X5|CRK25_ARATH0Cysteine-rich receptor-like protein kinase 25 (Precursor)
trEMBLtr|G7IE16|G7IE16_MEDTR0Cysteine-rich receptor-kinase-like protein {ECO:0000313|EMBL:AES62687.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006251353816792+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000625s00022682.1PF01657.12Stress-antifung411427.60E-26
Glyur000625s00022682.1PF01657.12Stress-antifung1612569.40E-21
Glyur000625s00022682.1PF00069.20Pkinase3565577.20E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control36.357
SRR1783600control35.939
SRR1783602moderate drought stress37.230
SRR1811619moderate drought stress36.785

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.048
DRR006520Root Summer glycyrrhizin high producing strain30.771
DRR006521Root Winter glycyrrhizin high producing strain5.652
DRR006522Root Winter glycyrrhizin high producing strain5.579
DRR006523Root Summer glycyrrhizin low producing strain24.161
DRR006524Root Summer glycyrrhizin low producing strain23.779
DRR006525Leaf Summer glycyrrhizin high producing strain5.874
DRR006526Leaf Summer glycyrrhizin high producing strain6.075

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.580
SRR2868004Drought Stress(Tissue:root)6.525
SRR2967015Control (Tissue:root)7.435

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.959
SRR9715740Leave16.753
SRR9715741Leave25.739
SRR9715739Root10.470
SRR9715742Root16.511
SRR9715743Root15.881

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.920
SRR8749028MeJA induced 9h4.630
SRR8749029MeJA induced 9h3.348
SRR8749030Uninduced4.746
SRR8749031Uninduced1.464
SRR8749032Uninduced1.042

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.027
SRR8400027Control-Root28.561

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved