Gene detail information of Glyur000625s00022691.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G06030.15.00E-121NPK1-related protein kinase 3
NRXP_004496768.10PREDICTED: mitogen-activated protein kinase kinase kinase 3-like [Cicer arietinum]
COGYP_006528519.11.00E-16serine/threonine protein kinase with PASTA sensor(s) [Melioribacter roseus P3M-2]
Swissprottr|Q40541|NPK1_TOBAC0Mitogen-activated protein kinase kinase kinase NPK1
trEMBLtr|G7IE47|G7IE47_MEDTR0MAP kinase kinase kinase {ECO:0000313|EMBL:AES62717.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006259184997158-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000625s00022691.1PF00069.20Pkinase551988.10E-25
Glyur000625s00022691.1PF00069.20Pkinase2033192.30E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.785
SRR1783600control3.820
SRR1783602moderate drought stress2.614
SRR1811619moderate drought stress2.658

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.149
DRR006520Root Summer glycyrrhizin high producing strain5.365
DRR006521Root Winter glycyrrhizin high producing strain2.329
DRR006522Root Winter glycyrrhizin high producing strain2.284
DRR006523Root Summer glycyrrhizin low producing strain1.447
DRR006524Root Summer glycyrrhizin low producing strain1.441
DRR006525Leaf Summer glycyrrhizin high producing strain1.869
DRR006526Leaf Summer glycyrrhizin high producing strain1.853

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.567
SRR2868004Drought Stress(Tissue:root)8.550
SRR2967015Control (Tissue:root)11.273

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.884
SRR9715740Leave2.232
SRR9715741Leave1.234
SRR9715739Root1.582
SRR9715742Root3.343
SRR9715743Root3.414

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.871
SRR8749028MeJA induced 9h8.678
SRR8749029MeJA induced 9h5.126
SRR8749030Uninduced1.862
SRR8749031Uninduced1.120
SRR8749032Uninduced0.875

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.049
SRR8400027Control-Root10.300

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved