Gene detail information of Glyur000626s00022205.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40300.14.00E-62ferritin 4
NRXP_003544308.13.39E-117PREDICTED: ferritin-3, chloroplastic-like [Glycine max]
COGYP_005081623.12.00E-07Ferritin [Pseudovibrio sp. FO-BEG1]
Swissprottr|Q948P6|FRI3_SOYBN2.00E-95Ferritin-3, chloroplastic (Precursor)
trEMBLtr|K7M833|K7M833_SOYBN1.00E-117Ferritin {ECO:0000256|RuleBase:RU361145}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006263533039099+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00522FTH1 EC:1.16.3.2 Mineral absorption map04978


Gene Ontology

biological_process

GO:0006826  iron ion transport

GO:0006879  cellular iron ion homeostasis


molecular_function

GO:0008199  ferric iron binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000626s00022205.1PF00210.19Ferritin952243.10E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.221
SRR1783600control0.561
SRR1783602moderate drought stress0.401
SRR1811619moderate drought stress1.579

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.256
DRR006520Root Summer glycyrrhizin high producing strain0.878
DRR006521Root Winter glycyrrhizin high producing strain0.267
DRR006522Root Winter glycyrrhizin high producing strain0.743
DRR006523Root Summer glycyrrhizin low producing strain0.486
DRR006524Root Summer glycyrrhizin low producing strain1.335
DRR006525Leaf Summer glycyrrhizin high producing strain0.214
DRR006526Leaf Summer glycyrrhizin high producing strain0.388

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.753
SRR2868004Drought Stress(Tissue:root)0.339
SRR2967015Control (Tissue:root)0.728

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.231
SRR9715740Leave0.051
SRR9715741Leave0.545
SRR9715739Root0.022
SRR9715742Root0.282
SRR9715743Root0.275

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.175
SRR8749028MeJA induced 9h0.134
SRR8749029MeJA induced 9h0.117
SRR8749030Uninduced0.306
SRR8749031Uninduced0.330
SRR8749032Uninduced0.064

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.234
SRR8400027Control-Root0.240

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved