Gene detail information of Glyur000626s00022216.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30150.1 | 3.00E-112 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003544901.1 | 0 | PREDICTED: UDP-glycosyltransferase 87A1-like [Glycine max] |
| COG | YP_001709036.1 | 6.00E-09 | glycosyl transferase [Clavibacter michiganensis subsp. sepedonicus] |
| Swissprot | tr|O64732|U87A1_ARATH | 6.00E-131 | UDP-glycosyltransferase 87A1 |
| trEMBL | tr|I1MBF5|I1MBF5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G37730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00626 | 81995 | 95433 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000626s00022216.1 | PF00201.13 | UDPGT | 240 | 391 | 6.50E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.385 |
| SRR1783600 | control | 16.488 |
| SRR1783602 | moderate drought stress | 15.835 |
| SRR1811619 | moderate drought stress | 18.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.348 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.527 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.679 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.664 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.753 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.626 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.563 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.138 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.702 |
| SRR2967015 | Control (Tissue:root) | 8.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.313 |
| SRR9715740 | Leave | 9.665 |
| SRR9715741 | Leave | 6.802 |
| SRR9715739 | Root | 6.712 |
| SRR9715742 | Root | 5.967 |
| SRR9715743 | Root | 6.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.414 |
| SRR8749028 | MeJA induced 9h | 4.181 |
| SRR8749029 | MeJA induced 9h | 8.483 |
| SRR8749030 | Uninduced | 10.354 |
| SRR8749031 | Uninduced | 3.186 |
| SRR8749032 | Uninduced | 5.420 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.915 |
| SRR8400027 | Control-Root | 5.867 |