Gene detail information of Glyur000627s00029175.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G21110.29.00E-127purin 7
NRXP_004505724.10PREDICTED: phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic-like [Cicer arietinum]
COGYP_005058957.13.00E-112Phosphoribosylaminoimidazolesuccinocarboxamide synthase [Granulicella mallensis MP5ACTX8]
Swissprottr|Q07463|PUR7_VIGAC0Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic (Precursor; Fragment)
trEMBLtr|K7M7R3|K7M7R3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G35690.2} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006273604043656+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01923purC EC:6.3.2.6 Purine metabolism map00230


Gene Ontology

biological_process

GO:0006164  purine nucleotide biosynthetic process


molecular_function

GO:0004639  phosphoribosylaminoimidazolesuccinocarboxamide synthase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000627s00029175.1PF01259.13SAICAR_synt1053438.20E-70


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.131
SRR1783600control16.490
SRR1783602moderate drought stress18.103
SRR1811619moderate drought stress17.810

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.394
DRR006520Root Summer glycyrrhizin high producing strain20.221
DRR006521Root Winter glycyrrhizin high producing strain28.991
DRR006522Root Winter glycyrrhizin high producing strain28.118
DRR006523Root Summer glycyrrhizin low producing strain20.739
DRR006524Root Summer glycyrrhizin low producing strain21.244
DRR006525Leaf Summer glycyrrhizin high producing strain19.085
DRR006526Leaf Summer glycyrrhizin high producing strain18.736

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.169
SRR2868004Drought Stress(Tissue:root)14.904
SRR2967015Control (Tissue:root)14.534

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.467
SRR9715740Leave20.726
SRR9715741Leave16.988
SRR9715739Root12.076
SRR9715742Root20.119
SRR9715743Root18.844

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.383
SRR8749028MeJA induced 9h19.006
SRR8749029MeJA induced 9h18.619
SRR8749030Uninduced6.904
SRR8749031Uninduced5.109
SRR8749032Uninduced6.959

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.848
SRR8400027Control-Root19.513

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved