Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000630s00024933.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G45550.1	2.00E-60	cytochrome P450, family 76, subfamily C, polypeptide 4
NR	CBI38803.3	5.21E-117	unnamed protein product [Vitis vinifera]
COG	YP_003265754.1	6.00E-26	cytochrome P450 [Haliangium ochraceum DSM 14365]
Swissprot	tr\|O64635\|C76C4_ARATH	1.00E-69	Cytochrome P450 76C4
trEMBL	tr\|F6I333\|F6I333_VITVI	5.00E-126	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB61350.1}

Sequence

Transcript Sequence

>Glyur000630s00024933.1
ATGGCAGAGCTACTACGTAACCCTGATAAATTAACAAAAGCAAGAAAAGAGTTGTGTCAAGCAATTGGCAAAGATGAAACACTTGAAGAATCACACATTTCCAAGTTGCCTTTCTTACAAGCAGTGGTGAAGGAAACTCTTCGCTTGCACCCACCAGGTCCATTGTTAGTACCCCACAAGTGTGATGAACCTGTGAACATATCTGGCTTCAAGGTGCCAAAAAACGCACAAGTCTTGGTCAATGTGTGGGCCATGGGAAGAGACCCAACCATATGGAAGAATCCAGATGTATTCACGCCTGAAAGGTTTTTGGAGTGTGACATTAACTATAAGGGTCATGATTTTGAGCTTATACCCTTTGGGGCAGGGAAAAGGATATGTCCAGGATTGCCATTGGCTCACAGGTCAGTGCATTTAATAGTGGCTTCCCTTGTACACAACTTTGAATGGAAGCTTGCTAATGGGCTAATGCCAGAACACATGAACATGGAGGAGCAATTTGGAATATTGTTGATCCAAACCCAAAACTCCGCCAAGTTTTCTCCAGGGCCACACCCATTTCCTATCATTGGAAACATCTTGGAACTTGGCAAAAATCCACACAAGGCACTCACCAAACTTTCCAACATCTATGGACCCATCATGACCCTAAAACTAGGAAAGATAACCACCATAGTAATCTCCTCTTCAGAACTAGCCAAACAAATCCTACATGAGATTGGCCAAATCTTTTCTAATAGGACAGTCCCACATGCAGCTTATGTACTTGATCATCACAAATTCTCAGTGGTGTGGCTACCCCATTCAGATCAATATTGGAGGAAACTAAAAAAAACTTATACTACAAAAATATTCTCCCCACAAATGCTTGACTCCACAAAAGTCCTTCGCCAACAAAAGTTACAAGAATTGTTGGATTATGTGAAGGAAAGATGCATGAAAGGTGAGGTTATAGATATTGGTGAAGGCTGTCTTTACAATAGTCCTGAATTCATTTTCACACACTTTCTTCTCTATGGATTTGGTTCAGTACTCTGCACCTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00630	19586	22327	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP76C4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000630s00024933.1	PF00067.17	p450	2	178	7.10E-56
Glyur000630s00024933.1	PF00067.17	p450	182	333	8.60E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.003
SRR1783602	moderate drought stress	0.043
SRR1811619	moderate drought stress	0.039

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.923
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.764

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.101
SRR2868004	Drought Stress(Tissue:root)	0.000
SRR2967015	Control (Tissue:root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	6.118
SRR9715740	Leave	1.377
SRR9715741	Leave	1.678
SRR9715739	Root	0.000
SRR9715742	Root	0.008
SRR9715743	Root	0.034

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.034
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.030
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.042
SRR8400027	Control-Root	0.023