Gene detail information of Glyur000630s00024940.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45550.19.00E-84cytochrome P450, family 76, subfamily C, polypeptide 4
NRXP_003623778.10Cytochrome P450 [Medicago truncatula]
COGYP_002500282.12.00E-28cytochrome P450 [Methylobacterium nodulans ORS 2060]
Swissprottr|Q8VWZ7|C76B6_CATRO1.00E-117Geraniol 8-hydroxylase
trEMBLtr|G7L1C7|G7L1C7_MEDTR0Cytochrome P450 family protein {ECO:0000313|EMBL:AES79996.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006309544897449-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP76C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000630s00024940.1PF00067.17p45081251.10E-08
Glyur000630s00024940.1PF00067.17p4501243223.60E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.567
SRR1783600control0.521
SRR1783602moderate drought stress0.528
SRR1811619moderate drought stress0.481

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.026
DRR006521Root Winter glycyrrhizin high producing strain0.163
DRR006522Root Winter glycyrrhizin high producing strain0.105
DRR006523Root Summer glycyrrhizin low producing strain0.431
DRR006524Root Summer glycyrrhizin low producing strain0.446
DRR006525Leaf Summer glycyrrhizin high producing strain4.904
DRR006526Leaf Summer glycyrrhizin high producing strain4.698

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.390
SRR2868004Drought Stress(Tissue:root)1.075
SRR2967015Control (Tissue:root)0.328

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.926
SRR9715740Leave30.801
SRR9715741Leave13.836
SRR9715739Root0.000
SRR9715742Root0.184
SRR9715743Root0.359

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.300
SRR8749028MeJA induced 9h0.103
SRR8749029MeJA induced 9h0.344
SRR8749030Uninduced0.085
SRR8749031Uninduced0.000
SRR8749032Uninduced0.014

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.226
SRR8400027Control-Root0.124

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved