Gene detail information of Glyur000631s00022346.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38025.1 | 1.00E-60 | Cysteine proteinases superfamily protein |
| NR | XP_004514942.1 | 5.97E-110 | PREDICTED: OTU domain-containing protein At3g57810-like [Cicer arietinum] |
| Swissprot | tr|Q8LBZ4|OTU_ARATH | 1.00E-20 | OTU domain-containing protein At3g57810 |
| trEMBL | tr|G7JLU6|G7JLU6_MEDTR | 1.00E-109 | Uncharacterized protein {ECO:0000313|EMBL:AFK38833.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00631 | 72331 | 77346 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | OTU |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000631s00022346.1 | PF02338.14 | OTU | 29 | 171 | 3.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.481 |
| SRR1783600 | control | 5.340 |
| SRR1783602 | moderate drought stress | 4.591 |
| SRR1811619 | moderate drought stress | 4.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.322 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.341 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.840 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.398 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.780 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.579 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.196 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.615 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.264 |
| SRR2967015 | Control (Tissue:root) | 13.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 22.714 |
| SRR9715740 | Leave | 23.714 |
| SRR9715741 | Leave | 15.973 |
| SRR9715739 | Root | 5.169 |
| SRR9715742 | Root | 7.168 |
| SRR9715743 | Root | 6.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.768 |
| SRR8749028 | MeJA induced 9h | 15.301 |
| SRR8749029 | MeJA induced 9h | 15.865 |
| SRR8749030 | Uninduced | 25.028 |
| SRR8749031 | Uninduced | 18.281 |
| SRR8749032 | Uninduced | 17.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.840 |
| SRR8400027 | Control-Root | 12.766 |