Gene detail information of Glyur000632s00032400.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G25400.1 | 4.00E-38 | |
| NR | NP_001238597.1 | 3.12E-73 | uncharacterized protein LOC100500214 [Glycine max] |
| COG | YP_160553.1 | 1.00E-28 | hypothetical protein ebA6173 [Aromatoleum aromaticum EbN1] |
| trEMBL | tr|C6T106|C6T106_SOYBN | 1.00E-73 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G45880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00632 | 52776 | 54129 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K16904 | DCTPP1 | EC:3.6.1.12 | Pyrimidine metabolism | map00240 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000632s00032400.1 | PF03819.12 | MazG | 33 | 101 | 1.10E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.170 |
| SRR1783600 | control | 2.416 |
| SRR1783602 | moderate drought stress | 0.955 |
| SRR1811619 | moderate drought stress | 0.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.897 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.607 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.190 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.659 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.589 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.678 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 53.060 |
| SRR2868004 | Drought Stress(Tissue:root) | 41.237 |
| SRR2967015 | Control (Tissue:root) | 35.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 4.259 |
| SRR9715742 | Root | 5.832 |
| SRR9715743 | Root | 4.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 33.604 |
| SRR8749028 | MeJA induced 9h | 11.810 |
| SRR8749029 | MeJA induced 9h | 66.221 |
| SRR8749030 | Uninduced | 11.362 |
| SRR8749031 | Uninduced | 10.922 |
| SRR8749032 | Uninduced | 15.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 20.799 |
| SRR8400027 | Control-Root | 15.615 |