Gene detail information of Glyur000633s00034360.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRATMG01360.15.00E-50cytochrome oxidase
NRAFB77168.12.58E-67cytochrome oxidase subunit 1, partial (mitochondrion) [Daucus carota subsp. carota]
COGYP_008976800.13.00E-47cytochrome c oxidase, subunit I [Phaeobacter gallaeciensis DSM 26640]
Swissprottr|P07506|COX1_SOYBN6.00E-69Cytochrome c oxidase subunit 1
trEMBLtr|B4XVW3|B4XVW3_9GENT3.00E-59Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006337438976451-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02256COX1 EC:1.9.3.1 Oxidative phosphorylation map00190
Cardiac muscle contractionmap04260
Alzheimer's diseasemap05010
Parkinson's diseasemap05012
Huntington's diseasemap05016
Non-alcoholic fatty liver disease (NAFLD)map04932


Gene Ontology

biological_process

GO:0009060  aerobic respiration

GO:0055114  oxidation-reduction process


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0004129  cytochrome-c oxidase activity

GO:0005506  iron ion binding

GO:0009055  electron carrier activity

GO:0020037  heme binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000633s00034360.1PF00115.15COX11632.70E-16
Glyur000633s00034360.1PF00115.15COX1621628.40E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.217
SRR1783600control3.197
SRR1783602moderate drought stress2.209
SRR1811619moderate drought stress2.452

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.376
DRR006520Root Summer glycyrrhizin high producing strain1.381
DRR006521Root Winter glycyrrhizin high producing strain1.035
DRR006522Root Winter glycyrrhizin high producing strain1.194
DRR006523Root Summer glycyrrhizin low producing strain3.983
DRR006524Root Summer glycyrrhizin low producing strain3.252
DRR006525Leaf Summer glycyrrhizin high producing strain0.656
DRR006526Leaf Summer glycyrrhizin high producing strain0.756

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.575
SRR2868004Drought Stress(Tissue:root)0.287
SRR2967015Control (Tissue:root)0.386

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.385
SRR9715740Leave2.237
SRR9715741Leave4.303
SRR9715739Root11.329
SRR9715742Root5.172
SRR9715743Root7.621

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.865
SRR8749028MeJA induced 9h0.995
SRR8749029MeJA induced 9h1.406
SRR8749030Uninduced2.651
SRR8749031Uninduced1.064
SRR8749032Uninduced4.724

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.153
SRR8400027Control-Root0.262

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved