Gene detail information of Glyur000634s00028963.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24590.13.00E-37plastidic type i signal peptidase 1
NRXP_004502521.13.54E-107PREDICTED: chloroplast processing peptidase-like [Cicer arietinum]
COGYP_007160577.17.00E-35signal peptidase I [Cyanobacterium aponinum PCC 10605]
Swissprottr|Q8H0W1|PLSP1_ARATH3.00E-44Chloroplast processing peptidase (Precursor)
trEMBLtr|I3T671|I3T671_LOTJA1.00E-104Uncharacterized protein {ECO:0000313|EMBL:AFK48013.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006343905243425+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03100lepB, TPP EC:3.4.21.89 Protein export map03060
Quorum sensingmap02024


Gene Ontology

biological_process

GO:0006508  proteolysis


cellular_component

GO:0016020  membrane

GO:0016021  integral component of membrane


molecular_function

GO:0008236  serine-type peptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000634s00028963.1PF00717.18Peptidase_S24581332.40E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.101
SRR1783600control19.410
SRR1783602moderate drought stress5.750
SRR1811619moderate drought stress5.571

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.041
DRR006520Root Summer glycyrrhizin high producing strain7.716
DRR006521Root Winter glycyrrhizin high producing strain4.744
DRR006522Root Winter glycyrrhizin high producing strain4.734
DRR006523Root Summer glycyrrhizin low producing strain20.496
DRR006524Root Summer glycyrrhizin low producing strain20.292
DRR006525Leaf Summer glycyrrhizin high producing strain4.986
DRR006526Leaf Summer glycyrrhizin high producing strain4.930

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.082
SRR2868004Drought Stress(Tissue:root)9.626
SRR2967015Control (Tissue:root)8.614

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.751
SRR9715740Leave11.721
SRR9715741Leave19.979
SRR9715739Root2.787
SRR9715742Root11.285
SRR9715743Root8.924

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.166
SRR8749028MeJA induced 9h37.445
SRR8749029MeJA induced 9h21.491
SRR8749030Uninduced5.880
SRR8749031Uninduced2.874
SRR8749032Uninduced2.967

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.151
SRR8400027Control-Root8.421

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved