Gene detail information of Glyur000635s00022441.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G50520.12.00E-86Phosphoglycerate mutase family protein
NRXP_004509162.11.77E-147PREDICTED: probable phosphoglycerate mutase GpmB-like [Cicer arietinum]
COGNP_518620.12.00E-40phosphoglycerate mutase [Ralstonia solanacearum GMI1000]
Swissprottr|Q9SCS3|PGML4_ARATH5.00E-105Phosphoglycerate mutase-like protein 4 {ECO:0000305}
trEMBLtr|I1K1S7|I1K1S7_SOYBN2.00E-134Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G10140.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00635749015644-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15634gpmB EC:5.4.2.12 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Glycine, serine and threonine metabolismmap00260


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000635s00022441.1PF00300.17His_Phos_1211775.50E-36
Glyur000635s00022441.1PF00300.17His_Phos_12714271.20E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.257
SRR1783600control3.449
SRR1783602moderate drought stress2.659
SRR1811619moderate drought stress2.828

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.599
DRR006520Root Summer glycyrrhizin high producing strain4.965
DRR006521Root Winter glycyrrhizin high producing strain3.652
DRR006522Root Winter glycyrrhizin high producing strain3.538
DRR006523Root Summer glycyrrhizin low producing strain1.965
DRR006524Root Summer glycyrrhizin low producing strain1.990
DRR006525Leaf Summer glycyrrhizin high producing strain12.337
DRR006526Leaf Summer glycyrrhizin high producing strain11.904

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.901
SRR2868004Drought Stress(Tissue:root)17.532
SRR2967015Control (Tissue:root)14.516

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.514
SRR9715740Leave15.356
SRR9715741Leave19.013
SRR9715739Root3.711
SRR9715742Root5.235
SRR9715743Root4.189

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.816
SRR8749028MeJA induced 9h24.257
SRR8749029MeJA induced 9h25.882
SRR8749030Uninduced16.735
SRR8749031Uninduced16.329
SRR8749032Uninduced11.073

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.066
SRR8400027Control-Root17.707

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved