Gene detail information of Glyur000635s00022451.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G66880.17.00E-167sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
NRXP_003629567.10Serine/threonine protein kinase SAPK3 [Medicago truncatula]
COGYP_643511.17.00E-25serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q39193|SRK2I_ARATH0Serine/threonine-protein kinase SRK2I
trEMBLtr|G7LGB9|G7LGB9_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK48751.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006356611971012+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000635s00022451.1PF00069.20Pkinase232949.50E-70


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control79.069
SRR1783600control79.606
SRR1783602moderate drought stress133.083
SRR1811619moderate drought stress133.038

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain146.119
DRR006520Root Summer glycyrrhizin high producing strain143.819
DRR006521Root Winter glycyrrhizin high producing strain68.070
DRR006522Root Winter glycyrrhizin high producing strain66.362
DRR006523Root Summer glycyrrhizin low producing strain161.780
DRR006524Root Summer glycyrrhizin low producing strain161.629
DRR006525Leaf Summer glycyrrhizin high producing strain59.271
DRR006526Leaf Summer glycyrrhizin high producing strain59.137

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)108.616
SRR2868004Drought Stress(Tissue:root)139.199
SRR2967015Control (Tissue:root)136.124

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave71.535
SRR9715740Leave89.559
SRR9715741Leave108.595
SRR9715739Root60.587
SRR9715742Root78.552
SRR9715743Root73.191

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h74.031
SRR8749028MeJA induced 9h77.159
SRR8749029MeJA induced 9h63.787
SRR8749030Uninduced51.268
SRR8749031Uninduced74.979
SRR8749032Uninduced59.583

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root107.409
SRR8400027Control-Root95.474

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved