Gene detail information of Glyur000638s00037802.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66250.10O-Glycosyl hydrolases family 17 protein
NRXP_007141916.10hypothetical protein PHAVU_008G236700g [Phaseolus vulgaris]
Swissprottr|Q9C7U5|E132_ARATH0Glucan endo-1,3-beta-glucosidase 2 (Precursor)
trEMBLtr|V7B8J4|V7B8J4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW13910.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00638104929108721+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17,CBM43


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K19891GN1_2_3 EC:3.2.1.39 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000638s00037802.1PF00332.13Glyco_hydro_17233427.90E-90
Glyur000638s00037802.1PF07983.8X83604314.10E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.985
SRR1783600control11.930
SRR1783602moderate drought stress5.130
SRR1811619moderate drought stress5.144

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.587
DRR006520Root Summer glycyrrhizin high producing strain14.429
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain3.861
DRR006524Root Summer glycyrrhizin low producing strain3.879
DRR006525Leaf Summer glycyrrhizin high producing strain0.678
DRR006526Leaf Summer glycyrrhizin high producing strain0.631

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.242
SRR2868004Drought Stress(Tissue:root)4.068
SRR2967015Control (Tissue:root)7.820

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.200
SRR9715740Leave0.000
SRR9715741Leave0.531
SRR9715739Root2.693
SRR9715742Root2.626
SRR9715743Root3.661

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.931
SRR8749028MeJA induced 9h11.399
SRR8749029MeJA induced 9h7.016
SRR8749030Uninduced0.031
SRR8749031Uninduced0.037
SRR8749032Uninduced0.499

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.362
SRR8400027Control-Root15.065

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved