Gene detail information of Glyur000639s00029936.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60670.1 | 5.00E-74 | PLATZ transcription factor family protein |
| NR | XP_007140796.1 | 9.32E-151 | hypothetical protein PHAVU_008G142900g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7B5E6|V7B5E6_PHAVU | 3.00E-151 | Uncharacterized protein {ECO:0000313|EMBL:ESW12790.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00639 | 132583 | 134908 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PLATZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000639s00029936.1 | PF04640.9 | PLATZ | 66 | 137 | 4.10E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.062 |
| SRR1811619 | moderate drought stress | 0.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.795 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.600 |
| SRR2967015 | Control (Tissue:root) | 0.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.093 |
| SRR9715740 | Leave | 0.546 |
| SRR9715741 | Leave | 0.580 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.239 |
| SRR9715743 | Root | 0.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.795 |
| SRR8749028 | MeJA induced 9h | 20.549 |
| SRR8749029 | MeJA induced 9h | 13.252 |
| SRR8749030 | Uninduced | 4.483 |
| SRR8749031 | Uninduced | 0.336 |
| SRR8749032 | Uninduced | 2.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.108 |
| SRR8400027 | Control-Root | 0.238 |