Gene detail information of Glyur000640s00024109.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68320.1 | 2.00E-52 | myb domain protein 62 |
| NR | NP_001235789.1 | 2.73E-130 | MYB transcription factor MYB84 [Glycine max] |
| Swissprot | tr|Q9LK95|MYB21_ARATH | 2.00E-59 | Transcription factor MYB21 |
| trEMBL | tr|Q0PJK4|Q0PJK4_SOYBN | 1.00E-130 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G35050.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00640 | 27272 | 28605 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000640s00024109.1 | PF00249.26 | Myb_DNA-binding | 11 | 58 | 3.20E-15 |
| Glyur000640s00024109.1 | PF00249.26 | Myb_DNA-binding | 64 | 107 | 2.10E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.039 |
| SRR1783600 | control | 0.019 |
| SRR1783602 | moderate drought stress | 0.040 |
| SRR1811619 | moderate drought stress | 0.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.705 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.589 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.045 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.004 |
| SRR2967015 | Control (Tissue:root) | 0.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.140 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.427 |
| SRR8749028 | MeJA induced 9h | 3.135 |
| SRR8749029 | MeJA induced 9h | 7.567 |
| SRR8749030 | Uninduced | 3.035 |
| SRR8749031 | Uninduced | 9.958 |
| SRR8749032 | Uninduced | 30.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.439 |
| SRR8400027 | Control-Root | 0.108 |