Gene detail information of Glyur000640s00024117.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00640 | 53531 | 54533 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K03010 | RPB2, POLR2B | EC:2.7.7.6 | Purine metabolism | map00230 |
| Pyrimidine metabolism | map00240 | |||
| RNA polymerase | map03020 | |||
| Huntington's disease | map05016 | |||
| Epstein-Barr virus infection | map05169 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.291 |
| SRR1783600 | control | 5.752 |
| SRR1783602 | moderate drought stress | 2.795 |
| SRR1811619 | moderate drought stress | 3.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.321 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.552 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.460 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.322 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.856 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.528 |
| SRR2967015 | Control (Tissue:root) | 2.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.032 |
| SRR9715740 | Leave | 0.062 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.327 |
| SRR9715742 | Root | 0.807 |
| SRR9715743 | Root | 0.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.641 |
| SRR8749028 | MeJA induced 9h | 2.649 |
| SRR8749029 | MeJA induced 9h | 3.378 |
| SRR8749030 | Uninduced | 0.065 |
| SRR8749031 | Uninduced | 0.477 |
| SRR8749032 | Uninduced | 0.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.852 |
| SRR8400027 | Control-Root | 4.416 |