Gene detail information of Glyur000641s00026549.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51820.10phosphoglucomutase
NRXP_003592358.10Phosphoglucomutase [Medicago truncatula]
COGYP_720925.10phosphoglucomutase [Trichodesmium erythraeum IMS101]
Swissprottr|Q9SM59|PGMP_PEA0Phosphoglucomutase, chloroplastic (Precursor)
trEMBLtr|G7IC40|G7IC40_MEDTR0Phosphogluco-mutase {ECO:0000313|EMBL:AES62609.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00641600314582+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01835pgm EC:5.4.2.2 Glycolysis / Gluconeogenesis map00010
Pentose phosphate pathwaymap00030
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520
Purine metabolismmap00230
Streptomycin biosynthesismap00521


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0071704  organic substance metabolic process


molecular_function

GO:0000287  magnesium ion binding

GO:0016868  intramolecular transferase activity, phosphotransferases


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000641s00026549.1PF02878.11PGM_PMM_I841557.20E-14
Glyur000641s00026549.1PF02878.11PGM_PMM_I1562042.60E-07
Glyur000641s00026549.1PF02879.11PGM_PMM_II2363394.90E-13
Glyur000641s00026549.1PF00408.15PGM_PMM_IV4855405.00E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control92.051
SRR1783600control92.604
SRR1783602moderate drought stress75.736
SRR1811619moderate drought stress75.143

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain59.072
DRR006520Root Summer glycyrrhizin high producing strain57.732
DRR006521Root Winter glycyrrhizin high producing strain5.408
DRR006522Root Winter glycyrrhizin high producing strain5.143
DRR006523Root Summer glycyrrhizin low producing strain9.397
DRR006524Root Summer glycyrrhizin low producing strain9.750
DRR006525Leaf Summer glycyrrhizin high producing strain105.692
DRR006526Leaf Summer glycyrrhizin high producing strain105.764

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.863
SRR2868004Drought Stress(Tissue:root)13.630
SRR2967015Control (Tissue:root)8.955

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave38.880
SRR9715740Leave41.837
SRR9715741Leave22.601
SRR9715739Root19.765
SRR9715742Root58.998
SRR9715743Root52.656

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.643
SRR8749028MeJA induced 9h6.101
SRR8749029MeJA induced 9h8.650
SRR8749030Uninduced3.349
SRR8749031Uninduced2.799
SRR8749032Uninduced2.720

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root156.064
SRR8400027Control-Root166.609

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved