Gene detail information of Glyur000641s00026550.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51810.12.00E-48gibberellin 20 oxidase 2
NRNP_001238302.11.06E-106gibberellin 20-oxidase 2 [Glycine max]
COGYP_006370287.11.00E-08putative iron/ascorbate oxidoreductase [Tistrella mobilis KA081020-065]
Swissprottr|Q39111|GAOX2_ARATH1.00E-56Gibberellin 20 oxidase 2
trEMBLtr|C6ZIG0|C6ZIG0_SOYBN4.00E-107Gibberellin 20-oxidase 2 {ECO:0000313|EMBL:ACJ76438.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006413304634785+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05282E1.14.11.12 EC:1.14.11.12 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000641s00026550.1PF14226.1DIOX_N631691.70E-27
Glyur000641s00026550.1PF03171.152OG-FeII_Oxy1702014.50E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.055
SRR1783600control0.116
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.963
DRR006520Root Summer glycyrrhizin high producing strain1.899
DRR006521Root Winter glycyrrhizin high producing strain0.447
DRR006522Root Winter glycyrrhizin high producing strain0.260
DRR006523Root Summer glycyrrhizin low producing strain0.246
DRR006524Root Summer glycyrrhizin low producing strain0.246
DRR006525Leaf Summer glycyrrhizin high producing strain0.217
DRR006526Leaf Summer glycyrrhizin high producing strain0.181

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.173
SRR2868004Drought Stress(Tissue:root)3.250
SRR2967015Control (Tissue:root)2.886

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.786
SRR9715740Leave0.000
SRR9715741Leave0.229
SRR9715739Root0.035
SRR9715742Root4.450
SRR9715743Root3.086

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.975
SRR8400027Control-Root3.033

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved