Gene detail information of Glyur000641s00026555.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51790.1 | 2.00E-33 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003536494.2 | 4.52E-90 | PREDICTED: transcription factor bHLH36-like [Glycine max] |
| Swissprot | tr|Q9FLI0|BH120_ARATH | 6.00E-38 | Transcription factor bHLH120 |
| trEMBL | tr|K7LL60|K7LL60_SOYBN | 2.00E-90 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G38620.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00641 | 74852 | 87217 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000641s00026555.1 | PF00010.21 | HLH | 39 | 89 | 3.60E-08 |
| Glyur000641s00026555.1 | PF00010.21 | HLH | 248 | 294 | 3.50E-05 |
| Glyur000641s00026555.1 | PF00010.21 | HLH | 508 | 557 | 5.00E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.931 |
| SRR1783600 | control | 3.897 |
| SRR1783602 | moderate drought stress | 7.760 |
| SRR1811619 | moderate drought stress | 7.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.153 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.115 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.015 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.881 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.878 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.869 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.043 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.607 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.487 |
| SRR2967015 | Control (Tissue:root) | 21.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.114 |
| SRR9715741 | Leave | 0.173 |
| SRR9715739 | Root | 0.341 |
| SRR9715742 | Root | 1.679 |
| SRR9715743 | Root | 1.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.067 |
| SRR8749028 | MeJA induced 9h | 0.020 |
| SRR8749029 | MeJA induced 9h | 0.151 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.148 |
| SRR8400027 | Control-Root | 6.912 |