Gene detail information of Glyur000641s00026557.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G25390.16.00E-102Protein kinase superfamily protein
NRXP_004496642.10PREDICTED: receptor-like serine/threonine-protein kinase At4g25390-like [Cicer arietinum]
COGYP_001958461.17.00E-20hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9STJ8|Y4539_ARATH5.00E-140Receptor-like serine/threonine-protein kinase At4g25390 (Precursor)
trEMBLtr|I1LDX6|I1LDX6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G38640.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00641104665106353-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000641s00026557.1PF00069.20Pkinase602118.00E-26
Glyur000641s00026557.1PF00069.20Pkinase4065227.60E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.651
SRR1783600control0.562
SRR1783602moderate drought stress1.263
SRR1811619moderate drought stress1.351

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.590
DRR006520Root Summer glycyrrhizin high producing strain5.640
DRR006521Root Winter glycyrrhizin high producing strain0.330
DRR006522Root Winter glycyrrhizin high producing strain0.322
DRR006523Root Summer glycyrrhizin low producing strain10.823
DRR006524Root Summer glycyrrhizin low producing strain10.454
DRR006525Leaf Summer glycyrrhizin high producing strain2.208
DRR006526Leaf Summer glycyrrhizin high producing strain1.375

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.983
SRR2868004Drought Stress(Tissue:root)20.138
SRR2967015Control (Tissue:root)27.135

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.280
SRR9715740Leave2.852
SRR9715741Leave2.597
SRR9715739Root14.156
SRR9715742Root25.086
SRR9715743Root21.978

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.168
SRR8749028MeJA induced 9h3.732
SRR8749029MeJA induced 9h2.903
SRR8749030Uninduced2.786
SRR8749031Uninduced6.294
SRR8749032Uninduced5.701

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.657
SRR8400027Control-Root10.778

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved