Gene detail

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Gene detail information of Glyur000643s00026926.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G51550.1	0	Malectin/receptor-like protein kinase family protein
NR	NP_001238536.1	0	receptor-like kinase [Glycine max]
COG	YP_001958461.1	9.00E-25	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	0	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|I1N4N3\|I1N4N3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G50610.1}

Sequence

Transcript Sequence

>Glyur000643s00026926.1
ATGGAAACCAGAACATCCACCCTCTTTCTCCTGCTGTGCCTCCTCTGCTTTTCCACAGCAGAGGATATTTACCACCCAGTTGAACTCTTCCGCATCAGCTGTGGCAATTCCAGCGACACCACATCGCTCGGTGGTCCAAATTGGATAGGAGACACCAACACGAAACTCCTCTCTGACTCTGACCCATCATCATCAGTTTCTGCTACTCCACTCACGCAACCCACCAAACAGGGACCTTACACCTCAGCCCGTCTCTCCTCCCACTCCCAATTCACCTACTCTTTCCCCCTCACCAAAGGCCCAAAGTTCCTCCGCCTCTTCTTCTACTCAACCTCGTTCAAAAACTTCAACCGCTCCAACGCCCTGTTCTCGGTCAAATCGGGCCAATACACCCTGCTTCAAGACTTCAACGCCTCGGTCAACGCCGACGCCGACGCCGACCAAGGAGACACGTTCATGAGAGAGTTCTGCATCAACGTCGAAGACGGCCAGAGGCTCAACGTGACGTTCATTCCGAGCACCACTCCTGATTCCTACGCTTTCATCAATGGAATCGAGGTGGTCTCAATGCCATATGATCTCTACTACACAGGCCCTGAAAACCCGGGGTTCCCGGTTATTGGCTCCACCGGCATGACGCAACTTAGCGTTGAAAACAACTATGCTCTGGAAACAACATACCGGTTAAACGTTGGGGGACGACAAATCCCACCCGCTAGTGACACCGGTATGCTCAGGACTTGGGATGCAGATGACGATTACTTAAAAACAGAGAGTGGACCCTCTGTTGACTATGGGCACAAACTCGAACTCACCTTCAGTACCACGGTTCCTAATTACACGGCACCCGACGAAGTGTACCGAACCTTAAGGAACATGGGAACGAACGCCACTGCCAACATGCTGTTCAACATGACTTGGGAGCTTCCCGTTGATTCGGGATTCAATTACCTGCTAAGGCTGCACTTTTGTGAGCTCGACCCGCTGGCAAACAACATCGGCGAAAGAGTGTTCTACATCTTCATAGATGATCAGGTGGCTCAAGCGGCTGCAGATGTTCTCCAATGGACCGATGGAAAGAAGGGCGTGCCAGTGGTTAGAAGCTACATAGTTATCATCCCACAGAGGAAGAATCAGAAAAGGACCACCCTTTCACTGAAACTGCATCCTCAAACTAACACCGGCTTCAGTGACGCAATGTTAAATGCAATCGAACTCTTCAAAATCAGCAACCCACAAGGCAGCCTCGCCGGACCCAACCCGGACCCTCCTCTGCAAATCCCTTCCACTCCCACCGATTCCCTTCGAAGCCCGAGAAAGAAAAACGGTGGAACAGTCGCCGAAGTCGCAGGTGGAGTACTTTCCAGTGTCGTCTTGATCTCCCTTGTGGTCGCTTTCTTCCTCATCAAACGCAGGAAGACTAACGTCGTCGACGACAACAAGGGTTCAAAACACGGAGGGTCGTCAAATCTGCCGACGAACCTCTGCCGCCACTTCTCAATCGAAGAAATCAGAATCGCCACCAACAACTTCGACGAGAACTTCGTGATTGGCGTGGGAGGGTTCGGCCACGTGTACAAGGGCTACGTGGACGGTGGATTAACGCCGGTTGCAATCAAACGCCTCAAACAGGGTTCTCAGCAGGGGGCAAACGAGTTCATGAACGAGATCGAGATGTTGTCCAGGCTCCGCCACGTGCACCTCGTGTCCCTCATCGGTTACTGCTACGAGAGCAACGAGATGGTTCTGGTTTACGATTTCATGGCACGTGGGACCCTCCGTGACCATCTCTACGACAAAGAGGACAACGATGATCCTCCCCTGTCGTGGAAGCAGAGGCTCCAGATATGCCTCGGTGCGGCGCGGGGGCTGCATTACCTCCATACGGGCGCGAAGCACATGATCATCCACCGCGACGTGAAGAGCACGAACATCCTTTTGGATGAGAAATGGGTGGCCAAGGTTTCGGACTTCGGGTTATCGCGGCTTGGGCCCACGGGTGTTTCAATGACCCACGTCAGCACCGTGGTGAAGGGGAGCATTGGGTATTTGGACCCAGAGTATTACAAACGGCAGCGTTTGACTGAGAAGTCTGACGTGTACTCTTTCGGGGTGGTGCTGTTGGAGGTATTGTGTGGGAGGCAGCCTTTGCTACGTACCGTGGAGAAGAGACGCGTGTCGCTCGTTGATTGGGCGAAGCTTTGCCATAAGATGGGGACGTTGCGTGAGATTGTGGACCCTGCGATCAAGGGTGAGATTGCTCCCGAGTGTTTGGGCAAGTTCGGGGAGGTTGCAATGAGCTGTTTGCTTGACGATGGGACCCAGAGGCCTTCCATGAACGACGTCGTTGGGGTGCTGGAGTTTGTGCTGCAGCTTCAGGAGGAGAATGCTACTGGTACTTATAAGGGAATGGTGGAGGAGAGGCGTGGAAATTATGAAGATGGCGATTACATTGACATGTTTAGTAGTACGATCAGCACTGGGGTGAGCATGACAACAAGCGATGAAGATCATAGTTATGGGACTAGCAAGGAATCTCATAGATTGATCACGGGCGATGTTTTCTCTGAGATTCACGATCCAAAGGGACGATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00643	17509	20103	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.3.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000643s00026926.1	PF12819.2	Malectin_like	32	409	2.80E-52
Glyur000643s00026926.1	PF07714.12	Pkinase_Tyr	516	784	2.20E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.154
SRR1783600	control	0.165
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.504
DRR006520	Root Summer glycyrrhizin high producing strain	17.763
DRR006521	Root Winter glycyrrhizin high producing strain	2.515
DRR006522	Root Winter glycyrrhizin high producing strain	2.365
DRR006523	Root Summer glycyrrhizin low producing strain	14.386
DRR006524	Root Summer glycyrrhizin low producing strain	14.465
DRR006525	Leaf Summer glycyrrhizin high producing strain	141.440
DRR006526	Leaf Summer glycyrrhizin high producing strain	141.105

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	2.579
SRR2868004	Drought Stress(Tissue:root)	3.123
SRR2967015	Control (Tissue:root)	8.782

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	37.047
SRR9715740	Leave	0.020
SRR9715741	Leave	91.534
SRR9715739	Root	0.000
SRR9715742	Root	27.934
SRR9715743	Root	21.306

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.164
SRR8749028	MeJA induced 9h	0.077
SRR8749029	MeJA induced 9h	0.734
SRR8749030	Uninduced	0.014
SRR8749031	Uninduced	0.287
SRR8749032	Uninduced	1.693

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.869
SRR8400027	Control-Root	3.337