Gene detail information of Glyur000644s00020336.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33650.10dynamin-related protein 3A
NRXP_006583773.10PREDICTED: dynamin-related protein 3A-like [Glycine max]
Swissprottr|Q8S944|DRP3A_ARATH0Dynamin-related protein 3A
trEMBLtr|K7L2I2|K7L2I2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G30150.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0064421139131-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17065DNM1L EC:3.6.5.5 TNF signaling pathway map04668
Mitophagy - yeastmap04139
Apoptosis - flymap04214
NOD-like receptor signaling pathwaymap04621


Gene Ontology

molecular_function

GO:0003924  GTPase activity

GO:0005525  GTP binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000644s00020336.1PF00350.18Dynamin_N392151.50E-51
Glyur000644s00020336.1PF01031.15Dynamin_M2245152.30E-99
Glyur000644s00020336.1PF02212.13GED6417311.10E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.697
SRR1783600control7.468
SRR1783602moderate drought stress10.474
SRR1811619moderate drought stress10.794

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.364
DRR006520Root Summer glycyrrhizin high producing strain8.162
DRR006521Root Winter glycyrrhizin high producing strain14.229
DRR006522Root Winter glycyrrhizin high producing strain13.165
DRR006523Root Summer glycyrrhizin low producing strain8.156
DRR006524Root Summer glycyrrhizin low producing strain8.299
DRR006525Leaf Summer glycyrrhizin high producing strain4.902
DRR006526Leaf Summer glycyrrhizin high producing strain4.845

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.680
SRR2868004Drought Stress(Tissue:root)12.826
SRR2967015Control (Tissue:root)15.218

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.397
SRR9715740Leave10.492
SRR9715741Leave10.085
SRR9715739Root4.142
SRR9715742Root11.286
SRR9715743Root11.042

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.658
SRR8749028MeJA induced 9h14.953
SRR8749029MeJA induced 9h12.979
SRR8749030Uninduced8.589
SRR8749031Uninduced12.282
SRR8749032Uninduced7.701

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.571
SRR8400027Control-Root15.585

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved