Gene detail information of Glyur000644s00020354.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34300.10lectin protein kinase family protein
NRXP_006606200.10PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Glycine max]
COGYP_001958461.11.00E-24hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9XID3|Y1343_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 (Precursor)
trEMBLtr|K7N421|K7N421_SOYBN0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00644111405113887-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000644s00020354.1PF01453.19B_lectin851686.90E-19
Glyur000644s00020354.1PF00954.15S_locus_glycop2433142.30E-07
Glyur000644s00020354.1PF00069.20Pkinase4557236.00E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.429
SRR1783600control1.489
SRR1783602moderate drought stress2.187
SRR1811619moderate drought stress1.987

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.879
DRR006520Root Summer glycyrrhizin high producing strain1.922
DRR006521Root Winter glycyrrhizin high producing strain0.559
DRR006522Root Winter glycyrrhizin high producing strain0.432
DRR006523Root Summer glycyrrhizin low producing strain0.663
DRR006524Root Summer glycyrrhizin low producing strain0.646
DRR006525Leaf Summer glycyrrhizin high producing strain6.510
DRR006526Leaf Summer glycyrrhizin high producing strain6.811

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.790
SRR2868004Drought Stress(Tissue:root)3.096
SRR2967015Control (Tissue:root)1.442

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.368
SRR9715740Leave7.475
SRR9715741Leave9.758
SRR9715739Root4.129
SRR9715742Root5.107
SRR9715743Root3.657

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.024

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.871
SRR8400027Control-Root2.033

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved