Gene detail information of Glyur000645s00028158.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G12260.1 | 8.00E-25 | NAC 007 |
| NR | XP_006591958.1 | 6.83E-72 | PREDICTED: NAC domain-containing protein 7-like [Glycine max] |
| Swissprot | tr|Q9FWX2|NAC7_ARATH | 5.00E-28 | NAC domain-containing protein 7 |
| trEMBL | tr|I1LNS3|I1LNS3_SOYBN | 3.00E-72 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G00760.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00645 | 10116 | 12348 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000645s00028158.1 | PF02365.10 | NAM | 9 | 56 | 1.10E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.092 |
| SRR1783600 | control | 0.103 |
| SRR1783602 | moderate drought stress | 0.209 |
| SRR1811619 | moderate drought stress | 0.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.572 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.498 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.328 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.368 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.650 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.691 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.667 |
| SRR2967015 | Control (Tissue:root) | 1.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.392 |
| SRR9715740 | Leave | 0.097 |
| SRR9715741 | Leave | 0.075 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.242 |
| SRR9715743 | Root | 0.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.003 |
| SRR8749028 | MeJA induced 9h | 0.075 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.035 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.540 |
| SRR8400027 | Control-Root | 0.622 |