Gene detail information of Glyur000647s00023054.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38220.22.00E-168Peptidase M20/M25/M40 family protein
NRXP_004498100.10PREDICTED: aminoacylase-1-like isoform X1 [Cicer arietinum]
COGYP_003836017.12.00E-28peptidase M20 [Micromonospora aurantiaca ATCC 27029]
trEMBLtr|A0A072VH72|A0A072VH72_MEDTR0Aminoacylase-1 {ECO:0000256|PIRNR:PIRNR036696}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006474044945124+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14677ACY1 EC:3.5.1.14 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0006520  cellular amino acid metabolic process

GO:0008152  metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0004046  aminoacylase activity

GO:0008237  metallopeptidase activity

GO:0016787  hydrolase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000647s00023054.1PF01546.23Peptidase_M201154351.80E-35
Glyur000647s00023054.1PF07687.9M20_dimer2293367.60E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control77.667
SRR1783600control78.055
SRR1783602moderate drought stress54.506
SRR1811619moderate drought stress54.108

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain69.954
DRR006520Root Summer glycyrrhizin high producing strain69.149
DRR006521Root Winter glycyrrhizin high producing strain43.274
DRR006522Root Winter glycyrrhizin high producing strain42.732
DRR006523Root Summer glycyrrhizin low producing strain61.147
DRR006524Root Summer glycyrrhizin low producing strain60.238
DRR006525Leaf Summer glycyrrhizin high producing strain33.246
DRR006526Leaf Summer glycyrrhizin high producing strain33.010

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.606
SRR2868004Drought Stress(Tissue:root)37.485
SRR2967015Control (Tissue:root)33.848

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.426
SRR9715740Leave23.814
SRR9715741Leave19.607
SRR9715739Root39.120
SRR9715742Root52.556
SRR9715743Root48.428

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.057
SRR8749028MeJA induced 9h14.400
SRR8749029MeJA induced 9h7.678
SRR8749030Uninduced5.165
SRR8749031Uninduced2.605
SRR8749032Uninduced4.962

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root60.573
SRR8400027Control-Root62.758

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved