Gene detail information of Glyur000648s00033126.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G25420.11.00E-1502-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
NRXP_006586607.10PREDICTED: gibberellin 20-oxidase 1 isoform X1 [Glycine max]
COGYP_005012048.11.00E-322OG-Fe(II) oxygenase [Niastella koreensis GR20-10]
Swissprottr|Q39110|GAOX1_ARATH0Gibberellin 20 oxidase 1
trEMBLtr|I1L3G4|I1L3G4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G27490.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006484629648244+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05282E1.14.11.12 EC:1.14.11.12 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000648s00033126.1PF14226.1DIOX_N641732.80E-26
Glyur000648s00033126.1PF03171.152OG-FeII_Oxy2293261.50E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.223
SRR1783600control3.206
SRR1783602moderate drought stress2.923
SRR1811619moderate drought stress2.913

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.358
DRR006520Root Summer glycyrrhizin high producing strain2.467
DRR006521Root Winter glycyrrhizin high producing strain2.534
DRR006522Root Winter glycyrrhizin high producing strain2.328
DRR006523Root Summer glycyrrhizin low producing strain6.808
DRR006524Root Summer glycyrrhizin low producing strain6.981
DRR006525Leaf Summer glycyrrhizin high producing strain6.359
DRR006526Leaf Summer glycyrrhizin high producing strain6.395

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.331
SRR2868004Drought Stress(Tissue:root)0.767
SRR2967015Control (Tissue:root)2.169

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.594
SRR9715740Leave10.604
SRR9715741Leave8.309
SRR9715739Root1.193
SRR9715742Root7.393
SRR9715743Root6.394

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.137
SRR8749028MeJA induced 9h3.984
SRR8749029MeJA induced 9h6.062
SRR8749030Uninduced4.402
SRR8749031Uninduced2.504
SRR8749032Uninduced5.701

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.317
SRR8400027Control-Root13.853

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved