Gene detail information of Glyur000649s00025281.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30000.10alpha-mannosidase 3
NRXP_004486029.10PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3-like [Cicer arietinum]
Swissprottr|Q93Y37|MNS3_ARATH0Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3
trEMBLtr|G7IPW7|G7IPW7_MEDTR0alpha-1,2-Mannosidase {ECO:0000256|RuleBase:RU361193}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006494557150377+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH47


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01230MAN1 EC:3.2.1.113 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0004571  mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

GO:0005509  calcium ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000649s00025281.1PF01532.15Glyco_hydro_471476311.30E-154


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.600
SRR1783600control21.524
SRR1783602moderate drought stress17.799
SRR1811619moderate drought stress17.718

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.307
DRR006520Root Summer glycyrrhizin high producing strain19.695
DRR006521Root Winter glycyrrhizin high producing strain20.961
DRR006522Root Winter glycyrrhizin high producing strain20.689
DRR006523Root Summer glycyrrhizin low producing strain26.398
DRR006524Root Summer glycyrrhizin low producing strain26.318
DRR006525Leaf Summer glycyrrhizin high producing strain14.588
DRR006526Leaf Summer glycyrrhizin high producing strain14.075

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.777
SRR2868004Drought Stress(Tissue:root)42.462
SRR2967015Control (Tissue:root)40.490

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.474
SRR9715740Leave19.966
SRR9715741Leave20.809
SRR9715739Root4.400
SRR9715742Root13.777
SRR9715743Root10.633

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.863
SRR8749028MeJA induced 9h29.757
SRR8749029MeJA induced 9h16.067
SRR8749030Uninduced15.553
SRR8749031Uninduced17.418
SRR8749032Uninduced12.927

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.087
SRR8400027Control-Root29.215

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved