Gene detail information of Glyur000651s00026833.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37630.1 | 1.00E-93 | myb-like HTH transcriptional regulator family protein |
| NR | XP_007140319.1 | 0 | hypothetical protein PHAVU_008G102300g [Phaseolus vulgaris] |
| Swissprot | tr|O80931|AS1_ARATH | 8.00E-155 | Transcription factor AS1 |
| trEMBL | tr|V7B638|V7B638_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW12313.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00651 | 35580 | 36656 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000651s00026833.1 | PF13921.1 | Myb_DNA-bind_6 | 7 | 68 | 1.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 71.241 |
| SRR1783600 | control | 72.211 |
| SRR1783602 | moderate drought stress | 102.070 |
| SRR1811619 | moderate drought stress | 101.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 120.122 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 118.409 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.752 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.825 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 136.397 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 137.645 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.734 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.152 |
| SRR2868004 | Drought Stress(Tissue:root) | 17.738 |
| SRR2967015 | Control (Tissue:root) | 21.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 30.963 |
| SRR9715740 | Leave | 31.903 |
| SRR9715741 | Leave | 34.059 |
| SRR9715739 | Root | 82.865 |
| SRR9715742 | Root | 56.902 |
| SRR9715743 | Root | 71.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.402 |
| SRR8749028 | MeJA induced 9h | 1.342 |
| SRR8749029 | MeJA induced 9h | 2.215 |
| SRR8749030 | Uninduced | 0.983 |
| SRR8749031 | Uninduced | 0.044 |
| SRR8749032 | Uninduced | 0.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 50.722 |
| SRR8400027 | Control-Root | 64.232 |