Gene detail information of Glyur000651s00026837.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09370.2 | 4.00E-123 | myb domain protein 3r-3 |
| NR | XP_006602590.1 | 0 | PREDICTED: MYB transcription factor MYB65 [Glycine max] |
| Swissprot | tr|Q9S7G7|MB3R1_ARATH | 2.00E-83 | Myb-related protein 3R-1 |
| trEMBL | tr|I1N2H1|I1N2H1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G39740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00651 | 69022 | 76190 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000651s00026837.1 | PF00249.26 | Myb_DNA-binding | 60 | 106 | 5.10E-14 |
| Glyur000651s00026837.1 | PF00249.26 | Myb_DNA-binding | 112 | 158 | 2.70E-17 |
| Glyur000651s00026837.1 | PF00249.26 | Myb_DNA-binding | 164 | 207 | 8.50E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.180 |
| SRR1783600 | control | 7.136 |
| SRR1783602 | moderate drought stress | 7.900 |
| SRR1811619 | moderate drought stress | 7.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.561 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.476 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.013 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.772 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.426 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.323 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.944 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.463 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.108 |
| SRR2967015 | Control (Tissue:root) | 14.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.116 |
| SRR9715740 | Leave | 9.075 |
| SRR9715741 | Leave | 10.848 |
| SRR9715739 | Root | 0.719 |
| SRR9715742 | Root | 4.480 |
| SRR9715743 | Root | 3.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.778 |
| SRR8749028 | MeJA induced 9h | 9.334 |
| SRR8749029 | MeJA induced 9h | 8.480 |
| SRR8749030 | Uninduced | 6.997 |
| SRR8749031 | Uninduced | 8.958 |
| SRR8749032 | Uninduced | 7.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.088 |
| SRR8400027 | Control-Root | 10.312 |