Gene detail information of Glyur000652s00019441.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G15180.10SET domain protein 2
NRXP_004487363.10PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like isoform X1 [Cicer arietinum]
COGYP_001154790.12.00E-10nuclear protein SET [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1]
Swissprottr|O23372|ATXR3_ARATH0Probable histone-lysine N-methyltransferase ATXR3
trEMBLtr|I1M406|I1M406_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G38090.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0065298770112293-


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000652s00019441.1PF00856.23SET189419501.10E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.955
SRR1783600control8.992
SRR1783602moderate drought stress11.695
SRR1811619moderate drought stress11.555

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.567
DRR006520Root Summer glycyrrhizin high producing strain10.401
DRR006521Root Winter glycyrrhizin high producing strain9.588
DRR006522Root Winter glycyrrhizin high producing strain9.262
DRR006523Root Summer glycyrrhizin low producing strain9.887
DRR006524Root Summer glycyrrhizin low producing strain9.930
DRR006525Leaf Summer glycyrrhizin high producing strain8.019
DRR006526Leaf Summer glycyrrhizin high producing strain8.055

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.086
SRR2868004Drought Stress(Tissue:root)36.776
SRR2967015Control (Tissue:root)38.251

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.880
SRR9715740Leave19.654
SRR9715741Leave19.972
SRR9715739Root2.189
SRR9715742Root23.523
SRR9715743Root19.473

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.782
SRR8749028MeJA induced 9h17.190
SRR8749029MeJA induced 9h5.770
SRR8749030Uninduced9.539
SRR8749031Uninduced8.426
SRR8749032Uninduced6.289

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.177
SRR8400027Control-Root27.746

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved